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Spatial considerations for linking watershed land cover to ecological indicators in streams. Effects of urban development in the Puget Lowland, Washington, on interannual streamflow patterns: Consequences for channel form and streambed disturbance. Predicting influences of urban development on thermal habitat in a warm water stream. Long-term trends in extreme recipitation events over the coterminous United States and Canada. Hydrology for Urban Planning-A Guidebook on the Hydrologic Effects of Urban Land Use. Responses of tidal creek macrobenthic communities to the effects of watershed development. Annual monitoring of young of the year abundance of smallmouth bass in rivers in Pennsylvania: Relationships between abundance, river characteristics, and spring fishing. Dry deposition of airborne trace metals on the Los Angeles Basin and adjacent coastal waters. Volume 1: Condition of Urban Wetlands Using Rapid (Level 2) and Intensive (Level 3) Assessment Methods. Experience from morphological research on Canadian streams: Is control of the two-year frequency runoff event the best basis for stream channel protection? Presented at the Effects of Watershed Developments and Management on Aquatic Ecosystems conference. When It Rains, It Pours: Global Warming and the Rising Frequency of Extreme Precipitation in the United States. Demographic, landscape and meteorological factors controlling the microbial pollution of coastal waters. The effectiveness of retention basins to protect aquatic life and physical habitat in three regions of the United States. Assessment of Cumulative Effects of Urbanization on Small Streams in the Puget Sound Lowland Ecoregion: Implications for Salmonid Resource Management. Urban impacts on physical stream condition: Effects on spatial scale, connectivity, and longitudinal trends. Biogeochemical hot spots and hot moments at the interface of terrestrial and aquatic ecosystems. Comparison of the pollutant loads in dry and wet weather runoff in a southern California urban watershed. Fish assemblage responses to urban intensity gradients in contrasting metropolitan areas: Birmingham, Alabama and Boston, Massachusetts. Symposium of the British Ecological Society jointly sponsored by the Ecological Society of America, M. Buried alive: Potential consequences of burying headwater streams in drainage pipes. Proceedings of the 2005 Georgia Water Resources Conference, held April 25­27, 2005, at the University of Georgia. Managing and rehabilitating ecosystem processes in regional urban streams in Australia. Invertebrate biodiversity in agricultural and urban headwater streams: Implications for conservation and management. Hydrological connectivity of headwaters to downstream waters: How science can inform policy. Downstream reduction of rural channel size with contrasting urban effects in small coastal streams of southeastern Australia. Stream temperature surges under urbanization and climate change: Data, models, and responses. Limited downstream response of stream channel size to urbanization in a humid tropical basin. Biological and Habitat Investigation of Greater Cincinnati Area Streams (Hamilton and Clermont Counties, Ohio). Submitted to the Department of Civil and Environmental Engineering, University of Wisconsin­Madison. Sources of pollutants in urban areas (part 2)-recent sheetflow monitoring results. Construction Site Erosion and Sediment Controls: Planning, Design, and Performance.

It is as easy to imagine that they began this way as that they decayed into their present state. Centromere-sized Bs could result from Robertsonian fusions that also generate small centromeric fragments (also containing telomeres). The sequence is found on at least 1 A chromosome of the species at low copy number (Leach et al. Thus, it seems likely that these repeats originated on A chromosomes, from which they colonized the B and then greatly expanded in copy number. Low copy number on an A could also be the result of a high copy number repeat on a B making frequent contributions to the A. The Origin of Bs We have not yet identified the source of Bs in any B-containing species. The key prerequisite is a centromere because acentric fragments are rapidly lost in both meiosis and mitosis. Of course, telomeres are also necessary but these could, in principle, evolve after a centromeric fragment appeared, as long as the centromere provided stable inheritance or drive. Centromeres do arise de novo in humans (Amor and Choo 2002), but how important this may be in B formation is completely unknown. Centromeric fragments can arise by Robertsonian fusions of 2 acrocentric chromosomes, and Bs in Paspalum stoloniferum (Avdulov and Titova 1933) and Haplopappus gracilis (Jackson 1960) are possible cases. Although this mechanism has the twin feature of generating a centromere and very little else, we have no idea how important it may have been in generating B chromosomes. In either case, the gigantea chromosomes may take on an independent existence within the aquatica genome, pairing with none of the other chromosomes. If it is nonhomologous, it remains as a univalent, does not interfere with meiosis, and carries out its own division and distribution independently, but erratically, like a B chromosome. Note that failure to pair with the As is of critical importance to the neo-B because pairing interferes with meiosis, resulting in a variable number of laggards and the production of abnormal and probably nonfunctional gametes. Thus, in any scheme for the evolution of early B chromosomes, failure to pair with As should evolve at once (while pairing may be favored between Bs to avoid univalent meiotic loss). There are several other ways in which interspecific movement may be congenial to Bs. They may enter a new genome already possessing drive and without any coadapted A genes opposing their spread. In addition, in some cases they can even bypass the initial block of lowered hybrid viability. Finally, Bs that are advantageous, such as those in Nectria that confer resistance to a pea antifungal, may confer an immediate advantage when introduced interspecifically (Camacho 2005). A centromeric fragment appeared after several generations of introgressing a Nasonia giraulti region into an N. The centromeric fragment steadily improved its inheritance through the female (and showed a decrease in mitotic instability) while still showing drag. The fact that different B variants within a species are closely related suggests that the rate of appearance of successful novel elements is small, compared to the rate of diversification of the existing B (Cabrero et al. They also appear to cross species borders, as suggested by the similarity between Bs in closely related species-for example, in Rhamdia fish (Fenocchio et al. Similar evidence of common origin in closely related species can be found in rodents (reviewed in Camacho 2005). Likewise, a reanalysis of grasshopper data supplied by Hewitt (1979) shows homogeneity of B characters. The frequency with which B chromosomes originate and the length of time that they persist within host lineages together determine the overall frequency of Bs within a host clade. In a dataset of 23,652 plant species that have had some sort of karyotypic study, of which 979 had Bs (4%), heterogeneity in the frequency of Bs was found at all ranks above the species level (Levin et al. About 8% of monocots have Bs versus 3% for eudicots; and they are mostly in nonmonocot basal angiosperms. Significant heterogeneity in B frequency 368 B Chromosomes occurs among related orders, families within orders, and major taxa within families. There are many B chromosomes hotspots, including Liliales and Commelinales at the order level. A Factors Associated with B Presence Genome Size In a review of factors associated with variation in genome size, we happened to notice that, whenever genome size increased, Bs were more frequent (plants vs. With no particular theoretical bias, we performed a detailed test of this observation across 226 species of British flowering plants for which we could also get data on possibly related variables, such as breeding system, chromosome number, and ploidy level (Palestis et al.

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The authors therefore suggest that chitosan impaired the absorption of fat-soluble vitamins, including vitamin K. Warfarin is a vitamin K antagonist and a reduction in vitamin K would be expected to enhance its effects. Importance and management Evidence is limited to this case, and the mechanism is largely speculative; however, an interaction seems probable. There appears to be no evidence regarding other anticoagulants, but, if the mechanism is correct, all vitamin K antagonists (coumarins and indanediones) would be expected to be similarly affected. Clinical evidence A case report describes an 83-year-old man, with type 2 diabetes, who was receiving warfarin (2. He was advised to stop this supplement and was subsequently restablised on warfarin. Pharmacokinetics Chondroitin is rapidly adsorbed from the gastrointestinal tract and the absolute bioavailability of an oral dose is about 15%. It is distributed into numerous tissues, with a particular affinity to articular cartilage and synovial fluid. Use and indications Chondroitin is an acid mucopolysaccharide and is found naturally in cartilage and connective tissue. Supplemental chondroitin is used for the management of arthritis and is often given with glucosamine, page 226, for osteoarthritis. Interactions overview No interactions with chondroitin taken alone found, but chondroitin is often given with glucosamine. Diterpenes including cinncassiols, and tannins such as cinnamtannins, are also present. Use and indications Both varieties of cinnamon are mainly used for digestive disorders such as diarrhoea, and flatulent colic or dyspepsia. Cinnamon has also been used for the common cold, and the oil may have antiseptic activity. Interactions overview It has been suggested that cinnamon may interfere with the control of diabetes by conventional antidiabetic drugs, but controlled studies do not appear to support this suggestion. Cinnamon is a constituent of various Chinese herbal medicines, see under bupleurum, page 89, for information. Constituents the bark of Cinnamomum cassia and Cinnamomum verum contains volatile oil mainly composed of trans-cinnamaldehyde, with cinnamylacetate, phenylpropylacetate, 136 Cinnamon 137 Cinnamon + Antidiabetics Although one study suggests that cinnamon may enhance the blood-glucose-lowering effects of conventional antidiabetics, a meta-analysis of controlled studies suggests otherwise. Clinical evidence In a placebo-controlled study, patients with type 2 diabetes were given Cinnamomum cassia 1 g, 3 g or 6 g daily (total of 30 patients) for a total of 40 days in addition to their normal medications. Changes in blood-glucose levels were only significant at 20 days in the 6 g group (blood-glucose decreased by 2. The study cited above, which was not designed to investigate a potential drug interaction, seems to suggest that cinnamon has the potential to enhance the blood-glucose-lowering effects of conventional antidiabetic medication (unnamed). However, recent meta-analysis of randomised controlled studies,3 which included the study cited above, found that cinnamon does not appear to improve the control of type 1 or type 2 diabetes (glycosylated haemoglobin, fasting blood glucose and lipids assessed). In general therefore, cinnamon would not be expected to markedly affect the control of diabetes with conventional antidiabetic drugs. If any effect does occur, it is likely to be picked up by standard blood-glucose monitoring, as high doses of cinnamon only had a significant effect on blood-glucose after 40 days of concurrent use. Cinnamon + Carbamazepine For mention that saiko-ka-ryukotsu-borei-to, of which cinnamon (Cinnamomum cassia) is one of 10 constituents, did not affect the pharmacokinetics of carbamazepine in an animal study, see Bupleurum + Carbamazepine, page 90. Cinnamon + Ofloxacin For mention that sairei-to, of which cinnamon (Cinnamomum cassia) is one of 12 constituents, did not affect the pharmacokinetics of ofloxacin, see Bupleurum + Ofloxacin, page 90. Use and indications Clivers is traditionally used for dysuria, cystitis, lymphadenitis, psoriasis and as a diuretic. Constituents Clivers contains the iridoids asperuloside, deacetylasperuloside and monotropein, polyphenolic acids, unspecified tannins based on gallic acid and flavonoids. C Constituents Cocoa seeds contain xanthine derivatives, principally theobromine (1% to 4%), with small amounts of caffeine (up to about 0. They are also rich in flavonoids from the flavanol and procyanidin groups, mainly catechin and epicatechin and their polymers. The nibs (cotyledons) are a rich source of cocoa butter (theobroma oil), which contains oleic, stearic, palmitic and linoleic acids.

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Three conserved histidine residues (positions 131, 133, and 135) shown in green comprise a "histidine triad" motif (HxHxH), which may mediate the 296 Walt Ream 4. This interaction is specific for the C-terminal region of VirD2, which includes the nuclear localization sequence (Figure 8-4), and it may affect nuclear import of VirD2. Phosphorylation of serine residues near a nuclear localization sequence can simulate nuclear import. The cyclophilin CypA binds amino acids 274-337, whereas Roc1 binds amino acids 174-337. A deletion that removes amino acids 338-356 does not affect VirD2 function (Shurvinton et al. The cellular function of these cyclophilins is not known, but they may act as chaperones that assist protein folding. CypA interacts strongly with residues 274-337 of VirD2, whereas Roc1 interacts weakly with residues 174-337 (Deng et al. In addition, most of this region is very poorly conserved among different VirD2 proteins (Figure 8-4), and it adjoins a region not required for VirD2 function (residues 338-356) (Shurvinton et al. Cyclosporin A, which disrupts the interaction of VirD2 with cyclophilins, also inhibits Agrobacterium-mediated transformation of plant cells (Deng et al. This approach is important for species recalcitrant to regeneration from tissue culture, because cells within embryos can be transformed. This provides an opportunity to obtain marker-free transgenic plants by transient selection of kanamycin-resistant plant cells (Rommens et al. Plant cells that express the kanamycin resistance gene transiently (but fail to inherit this gene stably) can be selected by temporary growth on medium containing kanamycin, and a significant fraction of these cells are stably transformed with the desired transgene (Rommens et al. Although such homologous recombination events can occur during plant transformation, they constitute a very small fraction of the total number of integration events. The chromosomal location of a transgene can affect expression of both the transgene and chromosomal genes at the site of insertion. Usually, plant scientists must examine hundreds (or thousands) of transformed plants to find one that exhibits appropriate transgene expression without affecting other important agronomic traits. An efficient integration system based on homologous recombination would allow engineers to place transgenes at specific chromosomal locations that allow good transgene expression without affecting host genes. For these reasons, an efficient transformation method that allows control over transgene insertion site is an important tool that plant genetic engineers currently lack. J Mol Biol 271: 718-727 Citovsky V, Warnick D, Zambryski P (1994) Nuclear import of Agrobacterium VirD2 and VirE2 proteins in maize and tobacco. Mol Cell Biol 18: 3907-3914 Covacci A, Rappuoli R (1993) Pertussis toxin export requires accessory genes located downstream from the pertussis toxin operon. Science 294: 23232328 Guyon P, Chilton M-D, Petit A, Tempe J (1980) Agropine in "null-type" crown gall tumors: evidence for the generality of the opine concept. J Bacteriol 182: 1541-1548 Hansen G, Chilton M-D (1996) "Agrolistic" transformation of plant cells: integration of T-strands generated in planta. Mol Microbiol 43: 1523-1532 Kunik T, Tzfira T, Kapulnik Y, Gafni Y, Dingwall C, Citovsky V (2001) Genetic transformation of HeLa cells by Agrobacterium. J Biol Chem 267: 20471-20480 Lessl M, Lanka E (1994) Common mechanisms in bacterial conjugation and Timediated transfer to plant cells. Plant Cell 8: 873-886 Otten L, DeGreve H, Leemans J, Hain R, Hooykass P, Schell J (1984) Restoration of virulence of vir region mutants of Agrobacterium tumefaciens strain B6S3 by coinfection with normal and mutant Agrobacterium strains. Mol Gen Genet 190: 204-414 Petit A, Tempe J, Kerr A, Holsters M, Van Montagu M, Schell J (1978) Substrate induction of conjugative activity of Agrobacterium tumefaciens Ti plasmids. Nucleic Acids Res 12: 6031-6041 Sheng J, Citovsky V (1996) Agrobacterium-plant cell interaction: have virulence proteins - will travel. Science 279: 873-876 Wang K, Herrera-Estrella A, Van Montagu M (1990) Overexpression of virD1 and virD2 genes in Agrobacterium tumefaciens enhances T-complex formation and plant transformation. The T4S systems are structurally complex machines assembled from a dozen or more membrane proteins often in response to environmental signals.

Thus, if a blood level is still low and seizures are occurring a few days after starting phenytoin, give a further partial load. Adjustments of maintenance doses in light of steady-state blood levels should be in small increments (<10% previous dose). Important interactions and unwanted effects Some sedation, serious arrhythmias; glycosuria and rarely hyponatraemia. Dosing Initially 150 mg/kg/24h in 2­3 divided doses to a maximum of 300 mg/ kg/24 h in 2­3 divided doses. Important interactions and unwanted effects Weight gain, nervousness, hyperkinesia, and less commonly drowsiness, and depression. Dosing Starting doses and escalation regimen 5­12 yrs: 500 microgram po at night initially. Important interactions and unwanted effects Dry mouth, constipation, increased appetite and weight gain, drowsiness. Prednisolone (prednisone) Neurological indications Treatment of infantile spasms and epileptic encephalopathies. Dosing Starting doses and escalation regimen Infantile spasms: 10 mg qds for 14 days; increasing to 20 mg tds after 7 days if no response. Maintenance doses Infantile spasms: if not controlled after 7 days increase to 20 mg tds for 7 days. Discontinuation regimen Infantile spasms: if taking 10 mg qds for 14 days, reduce by 10 mg every 5 days then stop. If dose increased to 20 mg tds for 7 days, reduce to 40 mg/24 h for 5 days then 20 mg/24 h for 5 days then 10 mg/24 h for 5 days then stop. Comments Prolonged steroid treatment over months requires monitoring of bone mineral density and calcium/vitamin D supplementation. Gastric protection with a protonpump inhibitor or H2-antagonist may be required at high doses or prolonged courses. Pregabalin Neurological indications Neuropathic pain and paraesthesiae; also adjunctive treatment of focal seizures). Dosing Starting doses and escalation regimen Over 12 yrs: 75 mg/24 h divided in 3 doses; 75 mg/24 h increments at weekly intervals. Procyclidine Neurological indications Emergency treatment of acute dystonia and oculogyric crises. Dosing Maintenance doses 2­12 yrs: up to 60 mg/24 h divided in 2­3 doses (max 4 mg/kg/24 h). Preparations Tablets (10, 40, 80, and 160 mg), oral solution (5 mg/5 mL, 10 mg/5 mL, 50 mg/5 mL). Important interactions and unwanted effects Postural hypotension at excessive doses. Dosing Starting doses and escalation regimen Neonate: 5­10 mg/dose (give 1 h before feeds) repeated as required up to 4­6-hourly. Important interactions and unwanted effects Nausea, vomiting, increased salivation, abdominal cramps. Pyridoxal phosphate Neurological indication Refractory epilepsy in infants (may be superior to pyridoxine). Pyridoxine (vitamin B6) Neurological indications Treatment of refractory epilepsy in infants (see b p. Preparation Tablets (10, 20, and 50 mg; can be halved, quartered, or crushed and dissolved in water), injection (50 mg/2 mL), liquid. Try not to make any other changes in anti-epileptics during this period to aid interpretation (see b p. The dose for optimal neurodevelopmental outcome may be greater than the dose that controls seizures. Dosing Starting doses and escalation regimen Movement disorder: over 12 yrs, 1 mg/24 h divided in 2 doses increasing at weekly intervals by 1 mg/24 h if required. Maintenance doses Movement disorder: over 12 yrs, up to 4 mg/24 h divided in 2 doses. Comments Use of antipsychotics to manage acutely disturbed behaviour should only be considered in extreme situations. Rufinamide Neurological indications Epilepsy, particularly Lennox-Gastaut syndrome. Dosing Child 4­18 years less than 30 kg: 100 mg bd increasing if required by 100 mg bd at 7­14-day intervals; max.

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